SNP Profiles of GHANA RED View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	CC	CC	GG	GT	AT	AA	CC	AG	GG	AA	TT	AA
1._RUQ_1229	_	_	_	_	_	_	_	AA	_	_	_	AA	_	_
2._RUQ_1229	_	_	_	_	_	_	_	AA	_	_	_	AA	_	_

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	GG	AA	CC	CC	CC	AA	GG	TT	AA	CC	TT	GG	CC	AA
1._RUQ_1229	GG	_	_	_	_	_	GG	_	AA	CC	_	_	_	_
2._RUQ_1229	GG	_	_	_	_	_	GG	_	AA	GG	_	_	_	_

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CC	TT	GG	GG	CT	TT	CC	AA	TT	GG	GG	CC	AA	CT
1._RUQ_1229	_	TT	GG	GG	_	_	CC	_	_	GG	-	_	AA	_
2._RUQ_1229	_	_	CC	GG	_	_	CC	_	CC	CC	GG	_	AA	_

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	AA	CC	AA	CT	CT	TT	AA	CT	TT	GG	TT	GG	GG	GG
1._RUQ_1229	_	_	_	_	_	_	_	_	TT	_	_	_	_	GG
2._RUQ_1229	_	_	AA	_	_	_	_	_	AA	_	_	_	_	CC

	57	58
_Input profile	CC	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._RUQ_1229	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._RUQ_1229	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: GHANA_RED RUQ_1229

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

1._GHANA_RED RUQ_1229

identical
14 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._GHANA_RED RUQ_1229

62.5 %
16 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Key to SNP Markers

Key to SNP Markers

1	TcSNP13	2	TcSNP19	3	TcSNP33	4	TcSNP49	5	TcSNP52
6	TcSNP131	7	TcSNP143	8	TcSNP144	9	TcSNP176	10	TcSNP189
11	TcSNP194	12	TcSNP230	13	TcSNP290	14	TcSNP305	15	TcSNP329
16	TcSNP363	17	TcSNP421	18	TcSNP519	19	TcSNP522	20	TcSNP546
21	TcSNP577	22	TcSNP589	23	TcSNP591	24	TcSNP602	25	TcSNP640
26	TcSNP642	27	TcSNP644	28	TcSNP645	29	TcSNP660	30	TcSNP702
31	TcSNP723	32	TcSNP731	33	TcSNP739	34	TcSNP800	35	TcSNP823
36	TcSNP835	37	TcSNP836	38	TcSNP872	39	TcSNP899	40	TcSNP945
41	TcSNP998	42	TcSNP1010	43	TcSNP1019	44	TcSNP1053	45	TcSNP1062
46	TcSNP1112	47	TcSNP1144	48	TcSNP1205	49	TcSNP1230	50	TcSNP1237
51	TcSNP1253	52	TcSNP1275	53	TcSNP1293	54	TcSNP1401	55	TcSNP1404
56	TcSNP1458	57	TcSNP1524	58	TcSNP1527